Biology:Quorum sensing

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Short description: Biological ability to detect and respond to cell population density

In biology, quorum sensing or quorum signaling (QS)[1] is the ability to detect and respond to cell population density by gene regulation. Quorum sensing is a type of cellular signaling, and more specifically can be considered a type of paracrine signaling. However, it also contains traits of both autocrine signaling: a cell produces both the autoinducer molecule and the receptor for the autoinducer.[2] As one example, QS enables bacteria to restrict the expression of specific genes to the high cell densities at which the resulting phenotypes will be most beneficial, especially for phenotypes that would be ineffective at low cell densities and therefore too energetically costly to express.[3] Many species of bacteria use quorum sensing to coordinate gene expression according to the density of their local population. In a similar fashion, some social insects use quorum sensing to determine where to nest. Quorum sensing in pathogenic bacteria activates host immune signaling and prolongs host survival, by limiting the bacterial intake of nutrients, such as tryptophan, which further is converted to serotonin.[4] As such, quorum sensing allows a commensal interaction between host and pathogenic bacteria.[4] Quorum sensing may also be useful for cancer cell communications.[5]

In addition to its function in biological systems, quorum sensing has several useful applications for computing and robotics. In general, quorum sensing can function as a decision-making process in any decentralized system in which the components have: (a) a means of assessing the number of other components they interact with and (b) a standard response once a threshold number of components is detected.

Discovery

Quorum sensing was first reported in 1970, by Kenneth Nealson, Terry Platt, and J. Woodland Hastings,[6] who observed what they described as a conditioning of the medium in which they had grown the bioluminescent marine bacterium Aliivibrio fischeri.[7] These bacteria did not synthesize luciferase—and therefore did not luminesce—in freshly inoculated culture but only after the bacterial population had increased significantly. Because they attributed this conditioning of the medium to the growing population of cells itself, they referred to the phenomenon as autoinduction.[6][8][7]

Bacteria

Quorum sensing of gram-negative cell
Gram-positive bacteria quorum sensing

Some of the best-known examples of quorum sensing come from studies of bacteria. Bacteria use quorum sensing to regulate certain phenotype expressions, which in turn, coordinate their behaviours. Some common phenotypes include biofilm formation, virulence factor expression, and motility. Certain bacteria are able to use quorum sensing to regulate bioluminescence, nitrogen fixation and sporulation.[9]

The quorum-sensing function is based on the local density of the bacterial population in the immediate environment.[10] It can occur within a single bacterial species, as well as between diverse species. Both gram-positive and gram-negative bacteria use quorum sensing, but there are some major differences in their mechanisms.[11]

Mechanism

For the bacteria to use quorum sensing constitutively, they must possess three abilities: secretion of a signaling molecule, secretion of an autoinducer (to detect the change in concentration of signaling molecules), and regulation of gene transcription as a response.[9] This process is highly dependent on the diffusion mechanism of the signaling molecules. QS signaling molecules are usually secreted at a low level by individual bacteria. At low cell density, the molecules may just diffuse away. At high cell density, the local concentration of signaling molecules may exceed its threshold level, and trigger changes in gene expression.[11]

Gram-positive bacteria

Gram-positive bacteria use autoinducing peptides (AIP) as their autoinducers.[12]

When gram-positive bacteria detect high concentration of AIPs in their environment, that happens by way of AIPs binding to a receptor to activate a kinase. The kinase phosphorylates a transcription factor, which regulates gene transcription. This is called a two-component system.

Another possible mechanism is that AIP is transported into the cytosol, and binds directly to a transcription factor to initiate or inhibit transcription.[12]

Gram-negative bacteria

Gram-negative bacteria produce N-acyl homoserine lactones (AHL) as their signaling molecule.[12] Usually AHLs do not need additional processing, and bind directly to transcription factors to regulate gene expression.[11]

Some gram-negative bacteria may use the two-component system as well.[12]

Examples

Aliivibrio fischeri

The bioluminescent bacterium A. fischeri is the first organism in which QS was observed. It lives as a mutualistic symbiont in the photophore (or light-producing organ) of the Hawaiian bobtail squid. When A. fischeri cells are free-living (or planktonic), the autoinducer is at low concentration, and, thus, cells do not show luminescence. However, when the population reaches the threshold in the photophore (about 1011 cells/ml), transcription of luciferase is induced, leading to bioluminescence. In A. fischeri bioluminescence is regulated by AHLs (N-acyl-homoserine lactones) which is a product of the LuxI gene whose transcription is regulated by the LuxR activator. LuxR works only when AHLs binds to the LuxR.

Curvibacter sp.

Curvibacter sp. is a gram-negative curved rod-formed bacterium which is the main colonizer of the epithelial cell surfaces of the early branching metazoan Hydra vulgaris.[13][14] Sequencing the complete genome uncovered a circular chromosome (4.37 Mb), a plasmid (16.5 kb), and two operons coding each for an AHL (N-acyl-homoserine lactone) synthase (curI1 and curI2) and an AHL receptor (curR1 and curR2).[14] Moreover, a study showed that these host associated Curvibacter bacteria produce a broad spectrum of AHL, explaining the presence of those operons.[14] As mentioned before, AHL are the quorum sensing molecules of gram-negative bacteria, which means Curvibacter has a quorum sensing activity.

Even though their function in host-microbe interaction is largely unknown, Curvibacter quorum-sensing signals are relevant for host-microbe interactions.[14] Indeed, due to the oxidoreductase activity of Hydra, there is a modification of AHL signalling molecules (3-oxo-homoserine lactone into 3-hydroxy-homoserine lactone) which leads to a different host-microbe interaction. On one hand, a phenotypic switch of the colonizer Curvibacter takes place. The most likely explanation is that the binding of 3-oxo-HSL and 3-hydroxy-HSL causes different conformational changes in the AHL receptors curR1 and curR2. As a result, there is a different DNA-binding motif affinity and thereby different target genes are activated.[14] On the other hand, this switch modifies its ability to colonize the epithelial cell surfaces of Hydra vulgaris.[14] Indeed, one explanation is that with a 3-oxo-HSL quorum-sensing signal, there is an up-regulation of flagellar assembly. Yet, flagellin, the main protein component of flagella, can act as an immunomodulator and activate the innate immune response in Hydra. Therefore, bacteria have less chance to evade the immune system and to colonize host tissues.[14] Another explanation is that 3-hydroxy-HSL induces carbon metabolism and fatty acid degradation genes in Hydra. This allows the bacterial metabolism to adjust itself to the host growth conditions, which is essential for the colonization of the ectodermal mucus layer of Hydrae.[14]

Escherichia coli

In the gram-negative bacterium Escherichia coli (E. coli), cell division may be partially regulated by AI-2-mediated quorum sensing. This species uses AI-2, which is produced and processed by the lsr operon. Part of it encodes an ABC transporter, which imports AI-2 into the cells during the early stationary (latent) phase of growth. AI-2 is then phosphorylated by the LsrK kinase, and the newly produced phospho-AI-2 can be either internalized or used to suppress LsrR, a repressor of the lsr operon (thereby activating the operon). Transcription of the lsr operon is also thought to be inhibited by dihydroxyacetone phosphate (DHAP) through its competitive binding to LsrR. Glyceraldehyde 3-phosphate has also been shown to inhibit the lsr operon through cAMP-CAPK-mediated inhibition. This explains why, when grown with glucose, E. coli will lose the ability to internalize AI-2 (because of catabolite repression). When grown normally, AI-2 presence is transient.

E. coli and Salmonella enterica do not produce AHL signals commonly found in other gram-negative bacteria. However, they have a receptor that detects AHLs from other bacteria and change their gene expression in accordance with the presence of other "quorate" populations of gram-negative bacteria.[15]

Salmonella enterica

Salmonella encodes a LuxR homolog, SdiA, but does not encode an AHL synthase. SdiA detects AHLs produced by other species of bacteria including Aeromonas hydrophila, Hafnia alvei, and Yersinia enterocolitica.[16] When AHL is detected, SdiA regulates the rck operon on the Salmonella virulence plasmid (pefI-srgD-srgA-srgB-rck-srgC) and a single gene horizontal acquisition in the chromosome srgE.[17][18] Salmonella does not detect AHL when passing through the gastrointestinal tracts of several animal species, suggesting that the normal microbiota does not produce AHLs. However, SdiA does become activated when Salmonella transits through turtles colonized with Aeromonas hydrophila or mice infected with Yersinia enterocolitica.[19][20] Therefore, Salmonella appears to use SdiA to detect the AHL production of other pathogens rather than the normal gut flora.

Pseudomonas aeruginosa

The opportunistic pathogen Pseudomonas aeruginosa uses quorum sensing to coordinate the formation of biofilm, swarming motility, exopolysaccharide production, virulence, and cell aggregation.[21] These bacteria can grow within a host without harming it until they reach a threshold concentration. Then they become aggressive, developing to the point at which their numbers are sufficient to overcome the host's immune system, and form a biofilm, leading to disease within the host as the biofilm is a protective layer encasing the bacterial population[citation needed]. Another form of gene regulation that allows the bacteria to rapidly adapt to surrounding changes is through environmental signaling. Recent studies have discovered that anaerobiosis can significantly impact the major regulatory circuit of quorum sensing. This important link between quorum sensing and anaerobiosis has a significant impact on the production of virulence factors of this organism.[22] There is hope among some humans that the therapeutic enzymatic degradation of the signaling molecules will be possible when treating illness caused by biofilms, and prevent the formation of such biofilms and possibly weaken established biofilms. Disrupting the signaling process in this way is called quorum sensing inhibition.[23]

Acinetobacter sp.

It has recently been found that Acinetobacter sp. also show quorum sensing activity. This bacterium, an emerging pathogen, produces AHLs.[24] Acinetobacter sp. shows both quorum sensing and quorum quenching activity. It produces AHLs and can also degrade the AHL molecules.[24]

Aeromonas sp.

This bacterium was previously considered a fish pathogen, but it has recently emerged as a human pathogen.[25] Aeromonas sp. have been isolated from various infected sites from patients (bile, blood, peritoneal fluid, pus, stool and urine). All isolates produced the two principal AHLs, N-butanoylhomoserine lactone (C4-HSL) and N-hexanoyl homoserine lactone (C6-HSL). It has been documented that Aeromonas sobria has produced C6-HSL and two additional AHLs with N-acyl side chain longer than C6.[26]

Yersinia

The YenR and YenI proteins produced by the gammaproteobacterium Yersinia enterocolitica are similar to Aliivibrio fischeri LuxR and LuxI.[27][28] YenR activates the expression of a small non-coding RNA, YenS. YenS inhibits YenI expression and acylhomoserine lactone production.[29] YenR/YenI/YenS are involved in the control of swimming and swarming motility.[28][29]

Molecules involved

Three-dimensional structures of proteins involved in quorum sensing were first published in 2001, when the crystal structures of three LuxS orthologs were determined by X-ray crystallography.[30] In 2002, the crystal structure of the receptor LuxP of Vibrio harveyi with its inducer AI-2 (which is one of the few biomolecules containing boron) bound to it was also determined.[31] Many bacterial species, including E. coli, an enteric bacterium and model organism for gram-negative bacteria, produce AI-2. A comparative genomic and phylogenetic analysis of 138 genomes of bacteria, archaea, and eukaryotes found that "the LuxS enzyme required for AI-2 synthesis is widespread in bacteria, while the periplasmic binding protein LuxP is present only in Vibrio strains," leading to the conclusion that either "other organisms may use components different from the AI-2 signal transduction system of Vibrio strains to sense the signal of AI-2 or they do not have such a quorum sensing system at all."[32] Vibrio species utilize Qrr RNAs, small non-coding RNAs, that are activated by these autoinducers to target cell density master regulators. Farnesol is used by the fungus Candida albicans as a quorum sensing molecule that inhibits filamentation.[33]

A database of quorum-sensing peptides is available under the name Quorumpeps.[34][35]

Certain bacteria can produce enzymes called lactonases that can target and inactivate AHLs. Researchers have developed novel molecules which block the signalling receptors of bacteria ("Quorum quenching"). mBTL is a compound that has been shown to inhibit quorum sensing and decrease the amount of cell death by a significant amount.[36] Additionally, researchers are also examining the role of natural compounds (such as caffeine) as potential quorum sensing inhibitors.[37] Research in this area has been promising and could lead to the development of natural compounds as effective therapeutics.

Evolution

Sequence analysis

The majority of quorum sensing systems that fall under the "two-gene" (an autoinducer synthase coupled with a receptor molecule) paradigm as defined by the Vibrio fischeri system occur in the gram-negative Pseudomonadota. A comparison between the Pseudomonadota phylogeny as generated by 16S ribosomal RNA sequences and phylogenies of LuxI-, LuxR-, or LuxS-homologs shows a notably high level of global similarity. Overall, the quorum sensing genes seem to have diverged along with the Pseudomonadota phylum as a whole. This indicates that these quorum sensing systems are quite ancient, and arose very early in the Pseudomonadota lineage.[38][39]

Although examples of horizontal gene transfer are apparent in LuxI, LuxR, and LuxS phylogenies, they are relatively rare. This result is in line with the observation that quorum sensing genes tend to control the expression of a wide array of genes scattered throughout the bacterial chromosome. A recent acquisition by horizontal gene transfer would be unlikely to have integrated itself to this degree. Given that the majority of autoinducer–synthase/receptor pairs occur in tandem in bacterial genomes, it is also rare that they switch partners and so pairs tend to co-evolve.[39]

In quorum sensing genes of Gammaproteobacteria, which includes Pseudomonas aeruginosa and Escherichia coli, the LuxI/LuxR genes form a functional pair, with LuxI as the auto-inducer synthase and LuxR as the receptor. Gammaproteobacteria are unique in possessing quorum sensing genes, which, although functionally similar to the LuxI/LuxR genes, have a markedly divergent sequence.[39] This family of quorum-sensing homologs may have arisen in the Gammaproteobacteria ancestor, although the cause of their extreme sequence divergence yet maintenance of functional similarity has yet to be explained. In addition, species that employ multiple discrete quorum sensing systems are almost all members of the Gammaproteobacteria, and evidence of horizontal transfer of quorum sensing genes is most evident in this class.[38][39]

Interaction of quorum-sensing molecules with mammalian cells and its medical applications

Next to the potential antimicrobial functionality, quorum-sensing derived molecules, especially the peptides, are being investigated for their use in other therapeutic domains as well, including immunology, central nervous system disorders and oncology. Quorum-sensing peptides have been demonstrated to interact with cancer cells, as well as to permeate the blood–brain barrier reaching the brain parenchyma.[40][41][42]

Role of quorum sensing in biofilm development

When aggregated in high enough densities, some bacteria may form biofilms to protect themselves from biotic or abiotic threats. Biofilms may also serve to transport nutrients into the microbial community or transport toxins out by means of channels that permeate the extracellular polymeric matrix (like cellulose) that holds the cells together. Finally, biofilms are an ideal environment for horizontal gene transfer through either conjugation or environmental DNA (eDNA) that exists in the biofilm matrix.[43]

The process of biofilm development is often triggered by environmental signals, and bacteria are proven to require flagella to successfully approach a surface, adhere to it, and form the biofilm.[43] As cells either replicate or aggregate in a location, the concentration of autoinducers outside of the cells increases until a critical mass threshold is reached. At this point, it is energetically unfavorable for intracellular autoinducers to leave the cell and they bind to receptors and trigger a signaling cascade to initiate gene expression and begin secreting an extracellular polysaccharide to encase themselves inside.[44]

Archaea

Examples

Methanosaeta harundinacea 6Ac

Methanosaeta harundinacea 6Ac, a methanogenic archaeon, produces carboxylated acyl homoserine lactone compounds that facilitate the transition from growth as short cells to growth as filaments.[45]

Viruses

A mechanism involving arbitrium has recently been described in bacteriophages infecting several Bacillus species.[46][47] The viruses communicate with each other to ascertain their own density compared to potential hosts. They use this information to decide whether to enter a lytic or lysogenic life-cycle.[48]

Plants

QS is important to plant-pathogen interactions, and their study has also contributed to the QS field more generally.[49][7] The first X-ray crystallography results for some of the key proteins were those of Pantoea stewartii subsp. stewartii in maize/corn[50][7] and Agrobacterium tumefaciens, a crop pathogen with a wider range of hosts.[51][52][7] These interactions are facilitated by quorum-sensing molecules and play a major role in maintaining the pathogenicity of bacteria towards other hosts, such as humans. This mechanism can be understood by looking at the effects of N-Acyl homoserine lactone (AHL), one of the quorum sensing-signaling molecules in gram-negative bacteria, on plants. The model organism used is Arabidopsis thaliana.[53]

The role of AHLs having long carbon-chains (C12, C14), which have an unknown receptor mechanism, is less well understood than AHLs having short carbon-chains (C4, C6, C8), which are perceived by the G protein-coupled receptor. A phenomenon called "AHL priming", which is a dependent signalling pathway, enhanced our knowledge of long-chain AHLs. The role of quorum-sensing molecules was better explained according to three categories: host physiology–based impact of quorum sensing molecules; ecological effects; and cellular signaling. Calcium signalling and calmodulin have a large role in short-chain AHLs' response in Arabidopsis. Research was also conducted on barley and the crop called yam bean (Pachyrhizus erosus) that reveals the AHLs determining the detoxification enzymes called GST were found less in yam bean.[54]

Quorum sensing-based regulatory systems are necessary to plant-disease-causing bacteria. Looking towards developing new strategies based on plant-associated microbiomes, the aim of further study is to improve the quantity and quality of the food supply. Further research into this inter-kingdom communication also enhances the possibility of learning about quorum sensing in humans.[55]

Quorum quenching

Quorum quenching is the process of preventing quorum sensing by disrupting signalling.[56] This is achieved by inactivating signalling enzymes, by introducing molecules that mimic signalling molecules and block their receptors, by degrading signalling molecules themselves, or by a modification of the quorum sensing signals due to an enzyme activity.[14][56][57][58]

Inhibition

Closantel and triclosan are known inhibitors of quorum sensing enzymes.[59] Closantel induces aggregation of the histidine kinase sensor in two-component signalling. The latter disrupts the synthesis of a class of signalling molecules known as N-acyl homoserine lactones (AHLs) by blocking the enoyl-acyl carrier protein (ACP) reductase.[59][60]

Mimicry

Two groups of well-known mimicking molecules include halogenated furanones, which mimic AHL molecules, and synthetic Al peptides (AIPs), which mimic naturally occurring AIPs. These groups inhibit receptors from binding substrate or decrease the concentration of receptors in the cell.[59] Furanones have also been found to act on AHL-dependant transcriptional activity, whereby the half life of the autoinducer-binding LuxR protein is significantly shortened.[61]

Degradation

Recently, a well-studied quorum quenching bacterial strain (KM1S) was isolated and its AHL degradation kinetics were studied using rapid resolution liquid chromatography (RRLC).[62] RRLC efficiently separates components of a mixture to a high degree of sensitivity, based on their affinities for different liquid phases.[63] It was found that the genome of this strain encoded an inactivation enzyme with distinct motifs targeting the degradation of AHLs.[62]

Modifications

As mentioned before, N-acyl-homoserine lactones (AHL) are the quorum sensing signaling molecules of the gram-negative bacteria. However, these molecules may have different functional groups on their acyl chain, and also a different length of acyl chain. Therefore, there exist many different AHL signaling molecules, for example, 3-oxododecanoyl-L-homoserine lactone (3OC12-HSL) or 3-hydroxydodecanoyl-L-homoserine lactone (3OHC12-HSL). The modification of those quorum sensing (QS) signaling molecules is another sort of quorum quenching. This can be carried out by an oxidoreductase activity.[14] As an example, we will discuss the interaction between a host, Hydra vulgaris, and the main colonizer of its epithelial cell surfaces, Curvibacter spp. Those bacteria produce 3-oxo-HSL quorum sensing molecules.[14] However, the oxidoreductase activity of the polyp Hydra is able to modify the 3-oxo-HSL into their 3-hydroxy-HSL counterparts.[14] We can characterize this as quorum quenching since there is an interference with quorum sensing molecules. In this case, the outcomes differ from simple QS inactivation: the host modification results in a phenotypic switch of Curvibacter, which modifies its ability to colonize the epithelial cell surfaces of H. vulgaris.[14]

Applications

Applications of quorum quenching that have been exploited by humans include the use of AHL-degrading bacteria in aquacultures to limit the spread of diseases in aquatic populations of fish, mollusks and crustaceans.[64] This technique has also been translated to agriculture, to restrict the spread of pathogenic bacteria that use quorum sensing in plants.[64][65] Anti-biofouling is another process that exploits quorum quenching bacteria to mediate the dissociation of unwanted biofilms aggregating on wet surfaces, such as medical devices, transportation infrastructure and water systems.[64][66] Quorum quenching is recently studied for the control of fouling and emerging contaminants in electro membrane bioreactors (eMBRs) for the advanced treatment of wastewater.[67] Extracts of several traditional medicinal herbs display quorum quenching acivity, and have potential antibacterial applications.[68][69]

Social insects

Social insect colonies are an excellent example of a decentralized system, because no individual is in charge of directing or making decisions for the colony. Several groups of social insects have been shown to use quorum sensing in a process that resembles collective decision-making.

Examples

Ants

Colonies of the ant Temnothorax albipennis nest in small crevices between rocks. When the rocks shift and the nest is broken up, these ants must quickly choose a new nest to move into. During the first phase of the decision-making process, a small portion of the workers leave the destroyed nest and search for new crevices. When one of these scout ants finds a potential nest, she assesses the quality of the crevice based on a variety of factors including the size of the interior, the number of openings (based on light level), and the presence or absence of dead ants.[70][71] The worker then returns to the destroyed nest, where she waits for a short period before recruiting other workers to follow her to the nest that she has found, using a process called tandem running. The waiting period is inversely related to the quality of the site; for instance, a worker that has found a poor site will wait longer than a worker that encountered a good site.[72] As the new recruits visit the potential nest site and make their own assessment of its quality, the number of ants visiting the crevice increases. During this stage, ants may be visiting many different potential nests. However, because of the differences in the waiting period, the number of ants in the best nest will tend to increase at the greatest rate. Eventually, the ants in this nest will sense that the rate at which they encounter other ants has exceeded a particular threshold, indicating that the quorum number has been reached.[73] Once the ants sense a quorum, they return to the destroyed nest and begin rapidly carrying the brood, queen, and fellow workers to the new nest. Scouts that are still tandem-running to other potential sites are also recruited to the new nest, and the entire colony moves. Thus, although no single worker may have visited and compared all of the available options, quorum sensing enables the colony as a whole to quickly make good decisions about where to move.

Honey bees

Honey bees (Apis mellifera) also use quorum sensing to make decisions about new nest sites. Large colonies reproduce through a process called swarming, in which the queen leaves the hive with a portion of the workers to form a new nest elsewhere. After leaving the nest, the workers form a swarm that hangs from a branch or overhanging structure. This swarm persists during the decision-making phase until a new nest site is chosen.

The quorum sensing process in honey bees is similar to the method used by Temnothorax ants in several ways. A small portion of the workers leave the swarm to search out new nest sites, and each worker assesses the quality of the cavity it finds. The worker then returns to the swarm and recruits other workers to her cavity using the honey bee waggle dance. However, instead of using a time delay, the number of dance repetitions the worker performs is dependent on the quality of the site. Workers that found poor nests stop dancing sooner, and can, therefore, be recruited to the better sites. Once the visitors to a new site sense that a quorum number (usually 10–20 bees) has been reached, they return to the swarm and begin using a new recruitment method called piping. This vibration signal causes the swarm to take off and fly to the new nest location. In an experimental test, this decision-making process enabled honey bee swarms to choose the best nest site in four out of five trials.[74][75]

Synthetic biology

Quorum sensing has been engineered using synthetic biological circuits in different systems. Examples include rewiring the AHL components to toxic genes to control population size in bacteria;[76] and constructing an auxin-based system to control population density in mammalian cells.[77] Synthetic quorum sensing circuits have been proposed to enable applications like controlling biofilms[78] or enabling drug delivery.[79] Quorum sensing based genetic circuits have been used to convert AI-2 signals to AI-1 and then subsequently use the AI-1 signal to alter bacterial growth rate, thereby changing the composition of a consortium.[80]

Computing and robotics

Quorum sensing can be a useful tool for improving the function of self-organizing networks such as the SECOAS (Self-Organizing Collegiate Sensor) environmental monitoring system. In this system, individual nodes sense that there is a population of other nodes with similar data to report. The population then nominates just one node to report the data, resulting in power savings.[81] Ad hoc wireless networks can also benefit from quorum sensing, by allowing the system to detect and respond to network conditions.[82]

Quorum sensing can also be used to coordinate the behavior of autonomous robot swarms. Using a process similar to that used by Temnothorax ants, robots can make rapid group decisions without the direction of a controller.[83]

See also


References

  1. ↑ "The Vibrio fischeri quorum-sensing systems ain and lux sequentially induce luminescence gene expression and are important for persistence in the squid host". Molecular Microbiology (Wiley Publishing) 50 (1): 319–331. October 2003. doi:10.1046/j.1365-2958.2003.t01-1-03585.x. PMID 14507383. 
  2. ↑ Postat, J; Bousso, P (September 11, 2019). "Quorum Sensing by Monocyte-Derived Populations". Frontiers in Immunology 10 (2140): 2140. doi:10.3389/fimmu.2019.02140. PMID 31572366. 
  3. ↑ Papenfort, K; Bassler, B (February 11, 2017). "Quorum-Sensing Signal-Response Systems in Gram-Negative Bacteria". Nature Reviews Microbiology 14 (9): 576–588. doi:10.1038/nrmicro.2016.89. PMID 27510864. 
  4. ↑ 4.0 4.1 "Vibrio cholerae high cell density quorum sensing activates the host intestinal innate immune response". Cell Reports 40 (12): 111368. September 2022. doi:10.1016/j.celrep.2022.111368. PMID 36130487. 
  5. ↑ "Doxycycline as Potential Anti-cancer Agent". Anti-Cancer Agents in Medicinal Chemistry 17 (12): 1617–1623. 16 January 2018. doi:10.2174/1871520617666170213111951. PMID 28270076. 
  6. ↑ 6.0 6.1 "Cellular control of the synthesis and activity of the bacterial luminescent system". Journal of Bacteriology 104 (1): 313–322. October 1970. doi:10.1128/jb.104.1.313-322.1970. PMID 5473898. 
  7. ↑ 7.0 7.1 7.2 7.3 7.4 "Quorum sensing in plant-pathogenic bacteria". Annual Review of Phytopathology (Annual Reviews) 41 (1): 455–482. 2003. doi:10.1146/annurev.phyto.41.052002.095652. PMID 12730390. https://opencommons.uconn.edu/cgi/viewcontent.cgi?article=1020&context=plsc_articles. 
  8. ↑ "Autoinduction of bacterial luciferase. Occurrence, mechanism and significance". Archives of Microbiology (Springer Science and Business Media LLC) 112 (1): 73–79. February 1977. doi:10.1007/bf00446657. PMID 843170. 
  9. ↑ 9.0 9.1 "Quorum sensing inhibitors: a patent overview". Expert Opinion on Therapeutic Patents 19 (11): 1581–1601. November 2009. doi:10.1517/13543770903222293. PMID 19732032. 
  10. ↑ "Quorum sensing in bacteria". Annual Review of Microbiology 55 (1): 165–199. 2001-10-01. doi:10.1146/annurev.micro.55.1.165. PMID 11544353. 
  11. ↑ 11.0 11.1 11.2 "How bacteria talk to each other: regulation of gene expression by quorum sensing". Current Opinion in Microbiology 2 (6): 582–587. December 1999. doi:10.1016/s1369-5274(99)00025-9. PMID 10607620. 
  12. ↑ 12.0 12.1 12.2 12.3 "Bacterial quorum sensing: its role in virulence and possibilities for its control". Cold Spring Harbor Perspectives in Medicine 2 (11): a012427. November 2012. doi:10.1101/cshperspect.a012427. PMID 23125205. 
  13. ↑ "Curvibacter fontana sp. nov., a microaerobic bacteria isolated from well water" (in en). https://www.researchgate.net/publication/45278794. 
  14. ↑ 14.00 14.01 14.02 14.03 14.04 14.05 14.06 14.07 14.08 14.09 14.10 14.11 14.12 "Host modification of a bacterial quorum-sensing signal induces a phenotypic switch in bacterial symbionts". Proceedings of the National Academy of Sciences of the United States of America 114 (40): E8488–E8497. October 2017. doi:10.1073/pnas.1706879114. PMID 28923926. Bibcode: 2017PNAS..114E8488P. 
  15. ↑ "Cell-to-cell signalling in Escherichia coli and Salmonella enterica". Molecular Microbiology 52 (4): 933–945. May 2004. doi:10.1111/j.1365-2958.2004.04054.x. PMID 15130116. 
  16. ↑ "SdiA of Salmonella enterica is a LuxR homolog that detects mixed microbial communities". Journal of Bacteriology 183 (19): 5733–5742. October 2001. doi:10.1128/JB.183.19.5733-5742.2001. PMID 11544237. 
  17. ↑ "Salmonella typhimurium encodes an SdiA homolog, a putative quorum sensor of the LuxR family, that regulates genes on the virulence plasmid". Journal of Bacteriology 180 (5): 1185–1193. March 1998. doi:10.1128/JB.180.5.1185-1193.1998. PMID 9495757. 
  18. ↑ "Detection of other microbial species by Salmonella: expression of the SdiA regulon". Journal of Bacteriology 185 (4): 1357–1366. February 2003. doi:10.1128/JB.185.4.1357-1366.2003. PMID 12562806. 
  19. ↑ Ausubel, Frederick M., ed (July 2008). "SdiA, an N-acylhomoserine lactone receptor, becomes active during the transit of Salmonella enterica through the gastrointestinal tract of turtles". PLOS ONE 3 (7): e2826. doi:10.1371/journal.pone.0002826. PMID 18665275. Bibcode: 2008PLoSO...3.2826S. 
  20. ↑ "Salmonella enterica serovar Typhimurium can detect acyl homoserine lactone production by Yersinia enterocolitica in mice". Journal of Bacteriology 192 (1): 29–37. January 2010. doi:10.1128/JB.01139-09. PMID 19820103. 
  21. ↑ "Pseudomonas aeruginosa displays multiple phenotypes during development as a biofilm". Journal of Bacteriology 184 (4): 1140–1154. February 2002. doi:10.1128/jb.184.4.1140-1154.2002. PMID 11807075. 
  22. ↑ Cornelis, P., ed (2008). Pseudomonas: Genomics and Molecular Biology (1st ed.). Caister Academic Press. ISBN 978-1-904455-19-6. http://www.horizonpress.com/pseudo. Retrieved 1 May 2022. 
  23. ↑ Ma, Yeping; Tang, Wing Suet; Liu, Sylvia Yang; Khoo, Bee Luan; Chua, Song Lin (2024-01-25). "Juglone as a Natural Quorum Sensing Inhibitor against Pseudomonas aeruginosa pqs-Mediated Virulence and Biofilms" (in en). ACS Pharmacology & Translational Science. doi:10.1021/acsptsci.3c00354. ISSN 2575-9108. https://pubs.acs.org/doi/10.1021/acsptsci.3c00354. 
  24. ↑ 24.0 24.1 "Characterization of N-acylhomoserine lactone-degrading bacteria associated with the Zingiber officinale (ginger) rhizosphere: co-existence of quorum quenching and quorum sensing in Acinetobacter and Burkholderia". BMC Microbiology 11 (1): 51. March 2011. doi:10.1186/1471-2180-11-51. PMID 21385437. 
  25. ↑ "Emerging Aeromonas species infections and their significance in public health". TheScientificWorldJournal 2012: 625023. 2012. doi:10.1100/2012/625023. PMID 22701365. 
  26. ↑ "Quorum sensing in Aeromonas species isolated from patients in Malaysia". Current Microbiology 62 (1): 167–172. January 2011. doi:10.1007/s00284-010-9689-z. PMID 20544198. 
  27. ↑ "Characterisation of the yenI/yenR locus from Yersinia enterocolitica mediating the synthesis of two N-acylhomoserine lactone signal molecules". Molecular Microbiology 17 (2): 345–356. July 1995. doi:10.1111/j.1365-2958.1995.mmi_17020345.x. PMID 7494483. 
  28. ↑ 28.0 28.1 "Quorum sensing in Yersinia enterocolitica controls swimming and swarming motility". Journal of Bacteriology 188 (4): 1451–1461. February 2006. doi:10.1128/JB.188.4.1451-1461.2006. PMID 16452428. 
  29. ↑ 29.0 29.1 "The quorum-hindered transcription factor YenR of Yersinia enterocolitica inhibits pheromone production and promotes motility via a small non-coding RNA". Molecular Microbiology 80 (2): 556–571. April 2011. doi:10.1111/j.1365-2958.2011.07595.x. PMID 21362062. 
  30. ↑ "A structural genomics approach to the study of quorum sensing: crystal structures of three LuxS orthologs". Structure 9 (6): 527–537. June 2001. doi:10.1016/S0969-2126(01)00613-X. PMID 11435117. 
  31. ↑ "Structural identification of a bacterial quorum-sensing signal containing boron". Nature 415 (6871): 545–549. January 2002. doi:10.1038/415545a. PMID 11823863. http://www.nsls.bnl.gov/newsroom/science/2002/pdfs/2002-09-Hughson.pdf. Retrieved 2004-04-28. 
  32. ↑ "Is autoinducer-2 a universal signal for interspecies communication: a comparative genomic and phylogenetic analysis of the synthesis and signal transduction pathways". BMC Evolutionary Biology 4 (1): 36. September 2004. doi:10.1186/1471-2148-4-36. PMID 15456522. 
  33. ↑ "Quorum sensing in the dimorphic fungus Candida albicans is mediated by farnesol". Applied and Environmental Microbiology 67 (7): 2982–2992. July 2001. doi:10.1128/AEM.67.7.2982-2992.2001. PMID 11425711. Bibcode: 2001ApEnM..67.2982H. 
  34. ↑ "Quorumpeps database: chemical space, microbial origin and functionality of quorum sensing peptides". Nucleic Acids Research 41 (Database issue): D655–D659. January 2013. doi:10.1093/nar/gks1137. PMID 23180797. 
  35. ↑ "Exploring the chemical space of quorum sensing peptides". Biopolymers 104 (5): 544–551. September 2015. doi:10.1002/bip.22649. PMID 25846138. 
  36. ↑ "A quorum-sensing inhibitor blocks Pseudomonas aeruginosa virulence and biofilm formation". Proceedings of the National Academy of Sciences of the United States of America 110 (44): 17981–17986. October 2013. doi:10.1073/pnas.1316981110. PMID 24143808. Bibcode: 2013PNAS..11017981O. 
  37. ↑ "Caffeine as a potential quorum sensing inhibitor". Sensors 13 (4): 5117–5129. April 2013. doi:10.3390/s130405117. PMID 23598500. Bibcode: 2013Senso..13.5117N. 
  38. ↑ 38.0 38.1 "The evolution of bacterial LuxI and LuxR quorum sensing regulators". Microbiology 147 (Pt 8): 2379–2387. August 2001. doi:10.1099/00221287-147-8-2379. PMID 11496014. 
  39. ↑ 39.0 39.1 39.2 39.3 "The evolutionary history of quorum-sensing systems in bacteria". Molecular Biology and Evolution 21 (5): 903–913. May 2004. doi:10.1093/molbev/msh097. PMID 15014168. 
  40. ↑ "The quorum sensing peptides PhrG, CSP and EDF promote angiogenesis and invasion of breast cancer cells in vitro". PLOS ONE 10 (3): e0119471. 2015. doi:10.1371/journal.pone.0119471. PMID 25780927. Bibcode: 2015PLoSO..1019471D. 
  41. ↑ "Crosstalk between the microbiome and cancer cells by quorum sensing peptides". Peptides 64: 40–48. February 2015. doi:10.1016/j.peptides.2014.12.009. PMID 25559405. 
  42. ↑ "Quorum Sensing Peptides Selectively Penetrate the Blood-Brain Barrier". PLOS ONE 10 (11): e0142071. Nov 2015. doi:10.1371/journal.pone.0142071. PMID 26536593. Bibcode: 2015PLoSO..1042071W. 
  43. ↑ 43.0 43.1 Bogino, P; de las Mercedes Oliva, M (July 30, 2013). "The Role of Bacterial Biofilms and Surface Components in Plant-Bacterial Associations". International Journal of Molecular Sciences 14 (8): 15838–15859. doi:10.3390/ijms140815838. PMID 23903045. 
  44. ↑ "How Quorum Sensing Works". American Society for Microbiology. https://asm.org:443/Articles/2020/June/How-Quorum-Sensing-Works. 
  45. ↑ "Acyl homoserine lactone-based quorum sensing in a methanogenic archaeon". The ISME Journal (Springer Science and Business Media LLC) 6 (7): 1336–1344. July 2012. doi:10.1038/ismej.2011.203. PMID 22237544. Bibcode: 2012ISMEJ...6.1336Z. 
  46. ↑ "Do you speak virus? Phages caught sending chemical messages". Nature. 2017. doi:10.1038/nature.2017.21313. https://www.nature.com/news/do-you-speak-virus-phages-caught-sending-chemical-messages-1.21313. 
  47. ↑ Stokar-Avihail A, Tal N, Erez Z, Lopatina A, Sorek R. Widespread Utilization of Peptide Communication in Phages Infecting Soil and Pathogenic Bacteria. Cell host & microbe. 2019 May 8;25(5):746-55.
  48. ↑ "Communication between viruses guides lysis-lysogeny decisions". Nature 541 (7638): 488–493. January 2017. doi:10.1038/nature21049. PMID 28099413. Bibcode: 2017Natur.541..488E. 
  49. ↑ "Quorum sensing in other plant-associated bacteria". Cell-cell signaling in bacteria. Washington, D.C.: American Society for Microbiology Press. 1999. pp. 101–15. ISBN 978-1-55581-149-5. OCLC 40075829. https://books.google.com/books?id=m0DdwAEACAAJ. 
  50. ↑ "Structural basis and specificity of acyl-homoserine lactone signal production in bacterial quorum sensing". Molecular Cell (Elsevier BV) 9 (3): 685–694. March 2002. doi:10.1016/s1097-2765(02)00480-x. PMID 11931774. 
  51. ↑ "The crystal structure of the quorum sensing protein TraR bound to its autoinducer and target DNA". The EMBO Journal (Wiley Publishing) 21 (17): 4393–4401. September 2002. doi:10.1093/emboj/cdf459. PMID 12198141. 
  52. ↑ "Structure of a bacterial quorum-sensing transcription factor complexed with pheromone and DNA". Nature (Springer Science and Business Media LLC) 417 (6892): 971–974. June 2002. doi:10.1038/nature10294. PMID 12087407. 
  53. ↑ "Influence of bacterial N-acyl-homoserine lactones on growth parameters, pigments, antioxidative capacities and the xenobiotic phase II detoxification enzymes in barley and yam bean". Frontiers in Plant Science 6: 205. 2015-04-10. doi:10.3389/fpls.2015.00205. PMID 25914699. 
  54. ↑ "Editorial: Plant responses to bacterial quorum sensing molecules". Frontiers in Plant Science 6: 643. 2015-08-19. doi:10.3389/fpls.2015.00643. PMID 26347761. 
  55. ↑ "Quorum sensing in plant-pathogenic bacteria". Annual Review of Phytopathology 41 (1): 455–482. 2003-01-01. doi:10.1146/annurev.phyto.41.052002.095652. PMID 12730390. https://opencommons.uconn.edu/cgi/viewcontent.cgi?article=1020&context=plsc_articles. 
  56. ↑ 56.0 56.1 "Shoot the Message, Not the Messenger-Combating Pathogenic Virulence in Plants by Inhibiting Quorum Sensing Mediated Signaling Molecules". Frontiers in Plant Science 8: 556. 2017. doi:10.3389/fpls.2017.00556. PMID 28446917. 
  57. ↑ "Task delegation to physician extenders--some comparisons". American Journal of Public Health 66 (1): 64–66. January 1976. doi:10.1186/1471-2180-11-51. PMID 21385437. 
  58. ↑ "A novel medium for the isolation of N-acylhomoserine lactone-degrading bacteria". Journal of Industrial Microbiology & Biotechnology 36 (2): 247–251. February 2009. doi:10.1007/s10295-008-0491-x. PMID 18946694. 
  59. ↑ 59.0 59.1 59.2 "Quorum quenching: Signal jamming in dental plaque biofilms". Journal of Dental Sciences 11 (4): 349–352. December 2016. doi:10.1016/j.jds.2016.02.002. PMID 30894996. 
  60. ↑ "Quorum sensing and signal interference: diverse implications". Molecular Microbiology 53 (6): 1563–1571. September 2004. doi:10.1111/j.1365-2958.2004.04234.x. PMID 15341639. 
  61. ↑ "Halogenated furanones inhibit quorum sensing through accelerated LuxR turnover". Microbiology 148 (Pt 4): 1119–1127. April 2002. doi:10.1099/00221287-148-4-1119. PMID 11932456. 
  62. ↑ 62.0 62.1 "Rapid degradation of N-3-oxo-acylhomoserine lactones by a Bacillus cereus isolate from Malaysian rainforest soil". Antonie van Leeuwenhoek 98 (3): 299–305. October 2010. doi:10.1007/s10482-010-9438-0. PMID 20376561. 
  63. ↑ "High-speed analyses using rapid resolution liquid chromatography on 1.8-microm porous particles". Journal of Separation Science 29 (16): 2421–2432. November 2006. doi:10.1002/jssc.200600267. PMID 17154122. 
  64. ↑ 64.0 64.1 64.2 "Quorum quenching: role in nature and applied developments". FEMS Microbiology Reviews 40 (1): 86–116. January 2016. doi:10.1093/femsre/fuv038. PMID 26432822. 
  65. ↑ "Applications of small molecule activators and inhibitors of quorum sensing in Gram-negative bacteria". Trends in Microbiology 20 (9): 449–458. September 2012. doi:10.1016/j.tim.2012.06.003. PMID 22771187. 
  66. ↑ "Modification of membrane surface for anti-biofouling performance: Effect of anti-adhesion and anti-bacteria approaches". Journal of Membrane Science 346 (1): 121–130. 2010. doi:10.1016/j.memsci.2009.09.028. 
  67. ↑ "Control of quorum sensing signals and emerging contaminants in electrochemical membrane bioreactors". Bioresource Technology 269: 89–95. December 2018. doi:10.1016/j.biortech.2018.08.041. PMID 30153550. Bibcode: 2018BiTec.269...89B. 
  68. ↑ "Quorum-quenching activity of some Iranian medicinal plants". New Microbes and New Infections 42: 100882. July 2021. doi:10.1016/j.nmni.2021.100882. PMID 34094582. 
  69. ↑ "Evaluation of quorum-sensing inhibitory effects of extracts of three traditional medicine plants with known antibacterial properties". New Microbes and New Infections 38: 100769. November 2020. doi:10.1016/j.nmni.2020.100769. PMID 33194208. 
  70. ↑ "Not everything that counts can be counted: ants use multiple metrics for a single nest trait". Proceedings. Biological Sciences 273 (1583): 165–169. January 2006. doi:10.1098/rspb.2005.3312. PMID 16555783. 
  71. ↑ "Tomb evaders: house-hunting hygiene in ants". Biology Letters 1 (2): 190–192. June 2005. doi:10.1098/rsbl.2005.0302. PMID 17148163. 
  72. ↑ "Individual and collective decision-making during nest-site selection by the ant Leptothorax albipennis". Behavioral Ecology and Sociobiology 50 (4): 352–9. 2001. doi:10.1007/s002650100377. 
  73. ↑ Pratt, S.C. (2005). "Quorum sensing by encounter rates in the ant Temnothorax albipennis". Behavioral Ecology 16 (2): 488–96. doi:10.1093/beheco/ari020. 
  74. ↑ "Group decision making in nest-site selection by honey bees". Apidologie 35 (2): 101–16. 2004. doi:10.1051/apido:2004004. 
  75. ↑ "Group decision making in honey bee swarms". American Scientist 94 (3): 220–9. 2006. doi:10.1511/2006.3.220. 
  76. ↑ "Programmed population control by cell-cell communication and regulated killing". Nature 428 (6985): 868–871. April 2004. doi:10.1038/nature02491. PMID 15064770. Bibcode: 2004Natur.428..868Y. 
  77. ↑ "Synthetic mammalian signaling circuits for robust cell population control". Cell 185 (6): 967–979.e12. March 2022. doi:10.1016/j.cell.2022.01.026. PMID 35235768. 
  78. ↑ "Synthetic quorum-sensing circuit to control consortial biofilm formation and dispersal in a microfluidic device". Nature Communications 3 (1): 613. January 2012. doi:10.1038/ncomms1616. PMID 22215088. Bibcode: 2012NatCo...3..613H. 
  79. ↑ "Synchronized cycles of bacterial lysis for in vivo delivery". Nature 536 (7614): 81–85. August 2016. doi:10.1038/nature18930. PMID 27437587. Bibcode: 2016Natur.536...81D. 
  80. ↑ "Bacterial co-culture with cell signaling translator and growth controller modules for autonomously regulated culture composition". Nature Communications 10 (1): 4129. September 2019. doi:10.1038/s41467-019-12027-6. PMID 31511505. Bibcode: 2019NatCo..10.4129S. 
  81. ↑ "The SECOAS Project—Development of a Self-Organising, Wireless Sensor Network for Environmental Monitoring". SANPA. 2004. http://www.cs.kent.ac.uk/projects/secoas/papers/SANPA-2004-Britton.pdf. 
  82. ↑ "Ant inspired server population management in a service-based computing environment". Swarm Intelligence Symposium, Proceedings 2005 IEEE. 2005. pp. 357–64. doi:10.1109/SIS.2005.1501643. ISBN 0-7803-8916-6. 
  83. ↑ "Measurement of Space: From Ants to Robots". 2002. 

Further reading

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